Insertion junction: CLIP2.031284_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031284
Chromosome:chromosome 11
Location:357845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467576 (1 of 1) PTHR33403//PTHR33403:SF5 - FAMILY NOT NAMED // PROTEIN SPIRAL1-LIKE 2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGTATGCGCCAGCCAAGCCGGGCCAGCTGCTGGCACCTACAACCT
Internal bar code:GTTAGCGAGTGGTGTAATTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACACCCGCAGTTACGCT
Suggested primer 2:GACAAGCTTGTGAGGCCTCT