Insertion junction: CLIP2.031285_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031285
Chromosome:chromosome 3
Location:4905881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178700 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTCCACACCGGGCCGCTGCGCTGCATCAGCCGCATGAGCGGCATGTC
Internal bar code:CGCGTTACGGTATCTGGCACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1212
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACATGTCCATCCGGTT
Suggested primer 2:CAAACCATTGCACATGCCCA