Insertion junction: CLIP2.031309_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031309
Chromosome:chromosome 5
Location:253598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243150 Carbonic anhydrase-related protein; (1 of 1) PF04357 - Family of unknown function (DUF490) (DUF490) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGTGGTGGGTGGATGGAGTTTGGGGTGGGGTGGGGTGTGGGGTGGG
Internal bar code:TTGTAACTTGGTGTCGTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTACTTGCGTTTGGTCCC
Suggested primer 2:AGCCGTGTATGTTGGGAGTG