Insertion junction: CLIP2.031313_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031313
Chromosome:chromosome 3
Location:7889476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202600 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCATTGATAACAGGAACGAACGAAGTCAGATGTTAGGAGCGGGAAAA
Internal bar code:ATTCTAGGATGCTAAATATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:32.0755
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTCGAACAAGTGGTCT
Suggested primer 2:CATTAGGTTTGAGCGCGCTC