Insertion junction: CLIP2.031317_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031317
Chromosome:chromosome 9
Location:2233757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGTGGCCCCCGCCAGCTGCTGCTGCGGCTGCTGCACGAGTTGATACT
Internal bar code:TAAGAGGATCTTCGGGCGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTAGGTAAGCACTGTGT
Suggested primer 2:TCGCTTTTGTTGCTGCTGTC