Insertion junction: CLIP2.031319_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031319
Chromosome:chromosome 13
Location:2070328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576950 (1 of 2) PTHR13690//PTHR13690:SF71 - FAMILY NOT NAMED // PROTEIN C37C3.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGATACGGTGGGGGCACCCCATACGGCCATACAGTATTCCGCGCCT
Internal bar code:TCGCAAACTGGGAAGTAACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGTCTCACCGTATGGG
Suggested primer 2:GAGTGCAATCACCCTGCTCT