Insertion junction: CLIP2.031323_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031323
Chromosome:chromosome 4
Location:3367477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227450 TPT9 Putative UDP-GlcA transporter; (1 of 4) PTHR11132//PTHR11132:SF97 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGGCATGCGTGGGATTGCAAGCGCCCAACGTACCAGCGACCGCCAG
Internal bar code:GGCAGTTGTGCGGTACCTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCTCCCCCTCCTTCACC
Suggested primer 2:TTCCCATGTCCCTTGTGCTC