Insertion junction: CLIP2.031326_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031326
Chromosome:chromosome 1
Location:583089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003500 CLUB1,MSH2 (1 of 1) IPR017987 - Wilm's tumour protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGTGGAGGAGCAGGTGCTGGTTGTGTGTGTGTGTGTGTGTGACATG
Internal bar code:AGACGGCCTCGGTCCCGCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCCTTGACAATCCCCC
Suggested primer 2:TACTCGGTCAACATGGCCAC