Insertion junction: CLIP2.031327_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031327
Chromosome:chromosome 3
Location:8802076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCCATGTGGAACAATGCCGTGATGTTGCGTGGCCGTGGCACACCTTC
Internal bar code:TTAATATTTCGAGTCAGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCAGACCTGCACGTTT
Suggested primer 2:CAGTAGCATACCAGCGCGTA