Insertion junction: CLIP2.031328_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031328
Chromosome:chromosome 3
Location:3887936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170625 (1 of 45) IPR023329 - Chlorophyll a/b binding protein domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCGCGTTTCTTGAGCAGCTAAGCATCGTGGCGGTATAAAGACAGTG
Internal bar code:CTTGTACAACAGGCTGATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1310
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGGACCAGGTTGTCAT
Suggested primer 2:AAGCTGAATCCGGTGATGGG