Insertion junction: CLIP2.031329_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031329
Chromosome:chromosome 17
Location:3282123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722050 (1 of 1) K19202 - histone deacetylase complex subunit SAP30 (SAP30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTGTCATTGTTCATCGTCGAACGGCTGCCTTCGTCAGAAAGCGATA
Internal bar code:GTAGGACTGCCATTAAGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTGACACCGGTTGTTG
Suggested primer 2:ACTGATGTGGCTGGTGAAGG