Insertion junction: CLIP2.031335_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031335
Chromosome:chromosome 7
Location:1426481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCAGTGGGCCACGAAGTCGTGTCCGGGCCAGGGCTGCTCCGCGAGG
Internal bar code:CCCCTTAAACAACTGGATGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGTAGAGGGAAGGGTCT
Suggested primer 2:GCGAATTGTTGCCATAGCCA