Insertion junction: CLIP2.031336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031336
Chromosome:chromosome 3
Location:7306248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGAGGCTGCCCGGCAGCGGGATCTGCATGTCCCGCAGACCCGCCAG
Internal bar code:GGGGCTGCTAGTCTGCGAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTTGTTCATCGCCTCG
Suggested primer 2:CTGTGTGGTGATGACGTGGA