Insertion junction: CLIP2.031340_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031340
Chromosome:chromosome 7
Location:5482982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351100 THB5,PRX (1 of 1) IPR000104//IPR001486//IPR009050 - Antifreeze protein, type I // Truncated hemoglobin // Globin-like; Truncated hemoglobin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCAGCATCCCGATCACCACCTGCATTAGTAATACACATGAGCCGGG
Internal bar code:TGCAGCGCGCACTTTCTTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2758
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCCAGACTGTTGGGTT
Suggested primer 2:CACACATACACACACACGCG