Insertion junction: CLIP2.031342_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031342
Chromosome:chromosome 17
Location:3299457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722250 RRM14 Putative rRNA (guanine-N2-)-methyltransferase; (1 of 1) 2.1.1.173//2.1.1.264 - 23S rRNA (guanine(2445)-N(2))-methyltransferase // 23S rRNA (guanine(2069)-N(7))-methyltransferase / 23S rRNA m(7)G(2069) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGTGATGTGGTGAAATGTTGGTTGGAACTGACATTGCGCGTGCAACG
Internal bar code:TCCGTTAAGGCCCGCGAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2157
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGCTGACTTCTGACGGG
Suggested primer 2:TCTCACATCGCGATACTGCC