Insertion junction: CLIP2.031348_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031348
Chromosome:chromosome 17
Location:3706766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGCCTAATGCCGCGCAGCACGTGCAAGCTGCAATGGGTTGACGTCCA
Internal bar code:TCACCATAAACCACCGTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATCTCTGCCTCTCCGA
Suggested primer 2:CCCAGCAGCCTCAAACAAAC