Insertion junction: CLIP2.031352_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031352
Chromosome:chromosome 8
Location:705806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360550 ERM3,NIRK,NIRK1 Copper-containing nitrite reductase, mitochondrial; (1 of 1) 1.7.2.1 - Nitrite reductase (NO-forming) / Pseudomonas cytochrome oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTATTCACAGCATGCGGACATACAGTCGCTGCATGCATGCCCACGCA
Internal bar code:ATGATGTTTTCGCTTATGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGGTCGGTACTTTGTAA
Suggested primer 2:TCAATCCTGTCCGTGACACG