Insertion junction: CLIP2.031363_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031363
Chromosome:chromosome 10
Location:1559969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428950 (1 of 1) PTHR11019//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCCATCGCCCAGCCTCGCATGCCGAAGCCGCGCCCCTCCTAGCAAC
Internal bar code:AAGCTGGCGTCTGGTTGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4606
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGACATCCAGCATCCCC
Suggested primer 2:CTCCTGTGCAGTTGTGTTGC