Insertion junction: CLIP2.031371_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031371
Chromosome:chromosome 12
Location:5965582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACCCTGCGGCAACAGCGTGTGTGGGCGACAGGAGTGAGCGGGCGCGG
Internal bar code:GTAGCGTGAGCGGCGGTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATACCAGGAACGTGACT
Suggested primer 2:TAAAAGGGGTCGCCAAGGTC