Insertion junction: CLIP2.031373_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031373
Chromosome:chromosome 17
Location:3017670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719876 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGGGCCGTTTTGTGTGTCGACGGCACGACCGGAGCCGTGGATGTGC
Internal bar code:CCTGCTCCACATCAACCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:67
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGTGTAAGAGGTTTGGG
Suggested primer 2:CTCCCCTCCTACTGCTAGCA