Insertion junction: CLIP2.031379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031379
Chromosome:chromosome 3
Location:2817665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGTGAGGAACCCCCTCCGATGGGGTATACTTCTGGCGAATCCACAC
Internal bar code:GCATCAGGCTTTGATATAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2192
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTGATCCGTGTCCTTT
Suggested primer 2:GTCCAAGTCCAAGGGAGTGG