Insertion junction: CLIP2.031382_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031382
Chromosome:chromosome 7
Location:556505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316400 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGAGAACACGGAAGGCTGGTAGGTTGAGACTGGAAATCCAACAGC
Internal bar code:ACGTGCGACTTCAGTGTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1387
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTTTGCTTCAGGCGTGC
Suggested primer 2:CAAGCGTTGGGTCACACAAG