Insertion junction: CLIP2.031386_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031386
Chromosome:chromosome 7
Location:1394947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323000 DP1,TDP1 Transcription factor, E2F/dimerisation partner; (1 of 2) PTHR12548:SF9 - TRANSCRIPTION FACTOR DP CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGACTTCAGCCGCTTCGCCGCGGGCACTGGTAAGCGAGCCTGATTT
Internal bar code:AGATGAGCGTATTGGGGCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCCGCCTACTCCTCTT
Suggested primer 2:GTCTTCTGCGCCCCCTATAC