Insertion junction: CLIP2.031386_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031386
Chromosome:chromosome 7
Location:1394949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323000 DP1,TDP1 Transcription factor, E2F/dimerisation partner; (1 of 2) PTHR12548:SF9 - TRANSCRIPTION FACTOR DP CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGTGCAAAGTCAAGCAAGCCCTGTTCGCAGGAGTGCAGCACCCAGC
Internal bar code:AGATGAGCGTATTGGGGCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1999
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTCTGCGCCCCCTATAC
Suggested primer 2:CTCTCCCGCCTACTCCTCTT