Insertion junction: CLIP2.031387_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031387
Chromosome:chromosome 11
Location:274380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467560 DYX1C1,PF23,DNAAF4 Dynein assembly factor PF23; (1 of 1) PTHR22904//PTHR22904:SF10 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCATGCACCGGTACCCGCGCCGTCGTTCCATCATCCCAGTACCCAA
Internal bar code:GTTGCGGTTCTGCAGGTATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAGGAGGAGGACGAAG
Suggested primer 2:TCCCTGCTCGTGACACTTTC