Insertion junction: CLIP2.031389_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031389
Chromosome:chromosome 5
Location:1065359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247851 CEP2 Cysteine endopeptidase; (1 of 2) 3.4.22.14 - Actinidain / Actinidin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCAAAACCTCGCATGCAGGTTGAGCCGGAGCGTGCATTTGGGCTGTG
Internal bar code:CCTGTTAATTTTTTGTGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTTAGGCCTAAGGGGAG
Suggested primer 2:CACAAATGCCGCTGTTCCAA