Insertion junction: CLIP2.031389_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031389
Chromosome:chromosome 5
Location:1065365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247851 CEP2 Cysteine endopeptidase; (1 of 2) 3.4.22.14 - Actinidain / Actinidin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTAATAGACCTCCTGCGTCAGCATCCCAAGCCCTTACGAGAACATG
Internal bar code:CCTGTTAATTTTTTGTGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1294
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAATGCCGCTGTTCCAA
Suggested primer 2:AGGGTTAGGCCTAAGGGGAG