Insertion junction: CLIP2.031392_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031392
Chromosome:chromosome 3
Location:7892846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202550 ELG11 Exostosin-like glycosyltransferase 11; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCACAGGCTCCACCACGTGCCTCTAAATGCTCTCCTGCGCCTTGCAT
Internal bar code:TCTATTAGAGATAGATCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAAGGTGAGCGGGTGTGG
Suggested primer 2:GGAGAGCACACGGAAAGGAA