Insertion junction: CLIP2.031392_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031392
Chromosome:chromosome 3
Location:7892846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202550 ELG11 Exostosin-like glycosyltransferase 11; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGCATGTGACGGCGGCTGTTCACACACCCTTGGCACAGGGGAGAGGG
Internal bar code:AGCGACCTGTTGTGTGCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4733
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGCACACGGAAAGGAA
Suggested primer 2:ATAAAGGTGAGCGGGTGTGG