Insertion junction: CLIP2.031395_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031395
Chromosome:chromosome 2
Location:6815329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388171 (1 of 2) PTHR12905//PTHR12905:SF0 - SPERM PROTEIN HOMOLOG // METALLOPHOSPHOESTERASE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACCCTCGTGCCGCCACTGACCTAGCACTCCTGCACACTGCATCCCA
Internal bar code:TTAATTGTATCCCGGTCGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGTAAGGGCATGATGC
Suggested primer 2:CGAATAGTTGAAGTGCCGCG