Insertion junction: CLIP2.031398_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031398
Chromosome:chromosome 1
Location:4035325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026650 (1 of 1) PTHR23293//PTHR23293:SF5 - FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE // PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGAAGCGTCTTTGGGCCTGTGCCTATGACTCGCCTGTGTGTGTGT
Internal bar code:GCCCCGGGGTCGACAAGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGCGGGAAAATAATGTC
Suggested primer 2:GGCGCCAAAAACTTAAGCCA