Insertion junction: CLIP2.031399_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031399
Chromosome:chromosome 17
Location:3895742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGTGCTCACGTGCGCGTAGCCGCCGTGCGTGGCGGCGGCCTTGCGTG
Internal bar code:AAATATCGGGCGTCTCACGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1638
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCACCCTGGAATTTGG
Suggested primer 2:TTCAAAAGCACCAAAGGGCG