Insertion junction: CLIP2.031400_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031400
Chromosome:chromosome 7
Location:3784681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338500 (1 of 102) PF01753 - MYND finger (zf-MYND) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGTGCCGGGCTGCGGGCGGGGCTGCGGGCGGGGGGGCTGCTGCCTGA
Internal bar code:AAGAGGCGGTTAAGCCACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACTCCTGTGCCATGTCC
Suggested primer 2:TCACATTTTCGTGCTTGCCG