Insertion junction: CLIP2.031404_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031404
Chromosome:chromosome 3
Location:8517123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211521 FAP165 (1 of 1) IPR006015//IPR006016//IPR014729 - Universal stress protein A // UspA // Rossmann-like alpha/beta/alpha sandwich fold; Flagellar Associated Protein 165 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGCTCGAATAAAGCCACACGGGTGCCCTCCTCACGTGGAGGCAGAG
Internal bar code:AAGGGTTGTGAGGACGGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1207
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCTTGTGCTGTTGTGC
Suggested primer 2:CACACGTTGCGCAACAGTTA