Insertion junction: CLIP2.031408_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031408
Chromosome:chromosome 13
Location:43172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801504 (1 of 1) K03470 - ribonuclease HII (rnhB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCTGCTCCCATCAGAATCTCCTTGAACGCCGGCGTGGTGTTCAAGA
Internal bar code:CTTCAACTGTTTGGCGTTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5039
LEAP-Seq percent confirming:54.9296
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAACAACAGGCTTGCGC
Suggested primer 2:CTGTCACTCCTCAGGCCTTG