Insertion junction: CLIP2.031413_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031413
Chromosome:chromosome 2
Location:877945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078966 FTSH9,FHL5 FtsH-like ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF70 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTGGTGTCGGCGGGAAGGGAAGGCAGCATGCAAACGTACGACAAGG
Internal bar code:CTCTAGATGGGCCAATCGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGATTCCCCATGCTTGT
Suggested primer 2:CCAACCTGCACAAATCTGCC