Insertion junction: CLIP2.031421_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031421
Chromosome:chromosome 6
Location:1764621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263100 (1 of 2) PF10263 - SprT-like family (SprT-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCATGGCGGCCTGGTCTTCGGGGCCCTCGATGTGACACGCTGTCCTT
Internal bar code:TCGATGAGGTGAGTCATACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1849
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTTTTTCTTGCCTGCG
Suggested primer 2:ATGATCCACGCCCACAACAT