Insertion junction: CLIP2.031425_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031425
Chromosome:chromosome 2
Location:1708338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086000 ARS8 Arylsulfatase; (1 of 1) IPR002591//IPR003882//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Pistil-specific extensin-like protein // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAGACTCCGACTATCTGCCGGTGTGGCTGCAGGTGTGTGTGGTTGTG
Internal bar code:GTATATTTTCTTGCGGAGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCATGCATAGCTGTCAGC
Suggested primer 2:CGCTGATGCCAAGTACATGC