Insertion junction: CLIP2.031428_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031428
Chromosome:chromosome 12
Location:1110860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491150 VPS55 (1 of 1) PF04133 - Vacuolar protein sorting 55 (Vps55); Vacuolar trafficking protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATCGGCGCGCTAATCATGGAGCTGGCTGCGGCGCTGGTGCTTGGGG
Internal bar code:TCTATTTTGTGATCGACGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGACATGTGGAGTGCGT
Suggested primer 2:AAGTTCCTCACCGGCTTCAG