Insertion junction: CLIP2.031452_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031452
Chromosome:chromosome 2
Location:5451191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800237 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAGAGCGGGCTGATTGGAAGTCCCAACTCTTTTTCCTTGTCGCCCTG
Internal bar code:TTATACGCTCTTGTTAATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2717
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGTCAACAGACGCTTG
Suggested primer 2:GGCCCTTGCTAGACTCGATC