Insertion junction: CLIP2.031457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031457
Chromosome:chromosome 2
Location:6814176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388171 (1 of 2) PTHR12905//PTHR12905:SF0 - SPERM PROTEIN HOMOLOG // METALLOPHOSPHOESTERASE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAATACAACCGCATGCGTGCTTTGTGACTTTGTGTTGGTGGGGCGTC
Internal bar code:AGTTACGGCTGGATGGGCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATGCCCTTACGCTTGC
Suggested primer 2:GCCGTTCAAACTCAACCCAC