Insertion junction: CLIP2.031473_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031473
Chromosome:chromosome 17
Location:3452824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723600 IFT81,FLA9 Intraflagellar Transport Protein 81; (1 of 1) IPR029600 - Intraflagellar transport protein 81 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTACCCGCGCACACTGGTGCATTGCCCGCTACGCCATGACGCACACT
Internal bar code:GCTCGTTCGTAAATAATATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTCTCCCTTCGATGAG
Suggested primer 2:GGAAGGGGATGACCAACTGG