Insertion junction: CLIP2.031480_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031480
Chromosome:chromosome 3
Location:4493521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175750 (1 of 1) PTHR12461:SF2 - JMJC DOMAIN-CONTAINING PROTEIN 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGGCCAGCCACACCCGCACCACCCGCACACAGCAGCCCAAAGGCGT
Internal bar code:ATGCTCATGACTTCGATTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACGATGACGATGACGA
Suggested primer 2:TCTGTAGCCCTCCTCTCCAC