Insertion junction: CLIP2.031484_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031484
Chromosome:chromosome 3
Location:2817881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGGCCTCTGCCGGCAGTGAGCACCCGCTACTGGTGAGCGGCGTGTC
Internal bar code:ATTCTCCAGGCTGCTTGAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2071
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTGCTTGTCCTTGTGC
Suggested primer 2:GTCCAAGTCCAAGGGAGTGG