Insertion junction: CLIP2.031486_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031486
Chromosome:chromosome 6
Location:5061644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACCCCTGCCGCCGCACTCAGATCCGGCGCAGTAATGGGGATTTGAAC
Internal bar code:GCTACAGATCTTCATCGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGCATGTGTGTACG
Suggested primer 2:CGTGGCTCTTCCCTGGAAAT