Insertion junction: CLIP2.031488_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031488
Chromosome:chromosome 10
Location:3302375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCACCTTTGCCTGCATCTCCGCTCTCACTCGCAGGTGCGCGCCAGT
Internal bar code:TCGGTGATAAGGGCTCGCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGACACCAGCATCCA
Suggested primer 2:AGGGTCTTGATTGCTCGGTG