Insertion junction: CLIP2.031492_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031492
Chromosome:chromosome 17
Location:3803259
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00162932

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGATTCGCCCGGAGTTAGTGCAGCCGCCCCCGGGGGGCCATGCGCGCC
Internal bar code:CTGAGTAGGGCAAAGTGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATACACGCTCGCAATTTCGC
Suggested primer 2:TCGTCCCATTCATTCACCGG