Insertion junction: CLIP2.031505_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031505
Chromosome:chromosome 8
Location:2323586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g371052 IRE1 (1 of 1) PTHR12506//PTHR12506:SF25//PTHR13954//PTHR13954:SF6 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED // IRE1-RELATED // SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAATGTCCTCAACCCAACGTCCTCCTCCGCACCAGTCGCATGAGCCA
Internal bar code:TTATTAGGCAAGCCGTTCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACGATCATGTGAGGCGC
Suggested primer 2:CAGCGTAGTGGAGATGCGAT