Insertion junction: CLIP2.031511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031511
Chromosome:chromosome 17
Location:2470502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715300 PKD2 (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Polycystin-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACAACCCGCAGGAGCTGCCCTACGCCTTCCACTTCTTCCCGCTGAGC
Internal bar code:TGGGTGTGGGCCTACCGAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGCGTACTTGCTGGAG
Suggested primer 2:GGTCTCACCAACCGTGTCAT