Insertion junction: CLIP2.031511_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031511
Chromosome:chromosome 17
Location:2470553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715300 PKD2 (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Polycystin-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGGTGGGGGAGCTCAGCACCGAGCAGTTGTAGAAGTCCAACACCTTG
Internal bar code:TTGGTCAGTCTAGATAACCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5052
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTCACCAACCGTGTCAT
Suggested primer 2:TGGAAGCGTACTTGCTGGAG